Package: eoa3 1.0.0.2

eoa3: Wildlife Mortality Estimator for Low Fatality Rates and Imperfect Detection

Evidence of Absence software (EoA) is a user-friendly application for estimating bird and bat fatalities at wind farms and designing search protocols. The software is particularly useful in addressing whether the number of fatalities has exceeded a given threshold and what search parameters are needed to give assurance that thresholds were not exceeded. The models are applicable even when zero carcasses have been found in searches, following Huso et al. (2015) <doi:10.1890/14-0764.1>, Dalthorp et al. (2017) <doi:10.3133/ds1055>, and Dalthorp and Huso (2015) <doi:10.3133/ofr20151227>.

Authors:Daniel Dalthorp [aut, cre]

eoa3_1.0.0.2.tar.gz
eoa3_1.0.0.2.zip(r-4.7)eoa3_1.0.0.2.zip(r-4.6)eoa3_1.0.0.2.zip(r-4.5)
eoa3_1.0.0.2.tgz(r-4.6-any)eoa3_1.0.0.2.tgz(r-4.5-any)
eoa3_1.0.0.2.tar.gz(r-4.7-any)eoa3_1.0.0.2.tar.gz(r-4.6-any)
eoa3_1.0.0.2.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
eoa3/json (API)

# Install 'eoa3' in R:
install.packages('eoa3', repos = c('https://ddalthorp.r-universe.dev', 'https://cloud.r-project.org'))
Uses libs:
  • jags– Just Another Gibbs Sampler for Bayesian MCMC - binary JAGS is Just Another Gibbs Sampler. It is a program for analysis of Bayesian hierarchical models using Markov Chain Monte Carlo (MCMC) simulation not wholly unlike BUGS. JAGS was written with three aims in mind: * To have an engine for the BUGS language that runs on Unix * To be extensible, allowing users to write their own functions, distributions and samplers. * To be a plaftorm for experimentation with ideas in Bayesian modelling This package contains the 'jags' binary as well as the associated shared library modules loaded by the binary.
  • c++– GNU Standard C++ Library v3
Datasets:
  • cpdata0 - A template for carcass persistence data with interval-censored carcass persistence times
  • days0 - A template for search schedule data
  • pkdata0 - A template for summarized searcher efficiency data with the number of carcasses available and the number discovered for N = 12 search occasions

On CRAN:

Conda:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

jagscpp

1.00 score 640 downloads 13 exports 61 dependencies

Last updated from:e83ff0bf54. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK128
source / vignettesOK179
linux-release-x86_64OK130
macos-release-arm64OK93
macos-oldrel-arm64OK97
windows-develOK178
windows-releaseOK78
windows-oldrelOK68
wasm-releaseOK115

Exports:calcMstarest_cp0est_g0est_pk0fmmaxfmmax.abgetabMCIMpriorOKpostMpostM.absim_cp0sim_pk0

Dependencies:actuarbase64encbslibcachemclicodacommonmarkcpp11crosstalkdigestDTevaluateexpintfastmapfontawesomefsgenericsGenEstgluegslgtoolshellnohighrhtmltoolshtmlwidgetshttpuvjquerylibjsonliteknitrlaterlatticelazyevallifecyclelubridatemagrittrMASSMatrixmatrixStatsmemoisemimemvtnormotelpromisesR6rappdirsRcpprjagsrlangrmarkdownsassshinyshinyjssourcetoolssurvivaltimechangetinytexVGAMwithrxfunxtableyaml