{ "_id": "6a4a404bdd8261766bb121ad", "Package": "eoa3", "Title": "Wildlife Mortality Estimator for Low Fatality Rates and\nImperfect Detection", "Version": "1.0.0.2", "Date": "2024-11-19", "Authors@R": "person(\"Daniel\", \"Dalthorp\", email = \"ddalthorp@protonmail.com\", role = c(\"aut\", \"cre\"))", "Description": "Evidence of Absence software (EoA) is a user-friendly\napplication for estimating bird and bat fatalities at wind\nfarms and designing search protocols. The software is\nparticularly useful in addressing whether the number of\nfatalities has exceeded a given threshold and what search\nparameters are needed to give assurance that thresholds were\nnot exceeded. The models are applicable even when zero\ncarcasses have been found in searches, following Huso et al.\n(2015) , Dalthorp et al. (2017)\n, and Dalthorp and Huso (2015)\n.", "License": "GPL-2", "Encoding": "UTF-8", "LazyData": "true", "RoxygenNote": "7.2.3", "NeedsCompilation": "no", "Packaged": { "Date": "2026-06-06 09:01:48 UTC", "User": "root" }, "Author": "Daniel Dalthorp [aut, cre]", "Maintainer": "Daniel Dalthorp ", "Config/pak/sysreqs": "cmake make libgsl0-dev jags libuv1-dev zlib1g-dev", "Repository": "https://ddalthorp.r-universe.dev", "Date/Publication": "2024-11-19 18:50:17 UTC", "RemoteUrl": "https://github.com/cran/eoa3", "RemoteRef": "HEAD", "RemoteSha": "e83ff0bf54261ef5aabd486989246f73b0a3aa6a", "_user": "ddalthorp", "_type": "src", "_file": "eoa3_1.0.0.2.tar.gz", "_fileid": "https://r2.ropensci.org/2dc587e23b1575c632b61f1343867a4ebc80a38db5f885387ab54debd34bb485", "_filesize": 187429, "_sha256": "2dc587e23b1575c632b61f1343867a4ebc80a38db5f885387ab54debd34bb485", "_expires": "2026-10-13T11:30:17.000Z", "_created": "2026-06-06T09:01:48.000Z", "_published": "2026-07-05T11:30:19.534Z", "_jobs": [ { 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"config": "windows-release", "r": "4.6.0", "check": "OK", "artifact": "7453080953" } ], "_host": "GitHub-Actions", "_buildurl": "https://github.com/r-universe/ddalthorp/actions/runs/27058033851", "_status": "success", "_upstream": "https://github.com/cran/eoa3", "_commit": { "id": "e83ff0bf54261ef5aabd486989246f73b0a3aa6a", "author": "Daniel Dalthorp ", "committer": "cran-robot ", "message": "version 1.0.0.2\n", "time": 1732042217 }, "_maintainer": { "name": "Daniel Dalthorp", "email": "ddalthorp@protonmail.com", "login": "ddalthorp", "description": "", "uuid": 30092223 }, "_distro": "noble", "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 3.5.0", "role": "Depends" }, { "package": "actuar", "role": "Imports" }, { "package": "GenEst", "role": "Imports" }, { "package": "MASS", "role": "Imports" }, { "package": "rjags", "role": "Imports" }, { "package": "survival", "role": "Imports" }, { "package": "VGAM", "role": "Imports" } ], "_owner": "cran", "_selfowned": true, "_usedby": 0, "_updates": [], "_tags": [], "_stars": 0, "_contributors": [ { "user": "ddalthorp", "count": 3, "uuid": 30092223 } ], "_userbio": { "uuid": 30092223, "type": "user", "name": "ddalthorp" }, "_downloads": { "count": 604, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/eoa3" }, "_searchresults": 0, "_topics": [ "jags", "cpp" ], "_rbuild": "4.6.0", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/eoa3.html", "manual.pdf" ], "_realowner": "ddalthorp", "_cranurl": false, "_releases": [ { "version": "1.0", "date": "2023-01-16" }, { "version": "1.0.0.1", "date": "2023-07-04" }, { "version": "1.0.0.2", "date": "2024-11-19" } ], "_exports": [ "calcMstar", "est_cp0", "est_g0", "est_pk0", "fmmax", "fmmax.ab", "getab", "MCI", "MpriorOK", "postM", "postM.ab", "sim_cp0", "sim_pk0" ], "_datasets": [ { "name": "cpdata0", "title": "A template for carcass persistence data with interval-censored carcass persistence times", "object": "cpdata0", "class": [ "data.frame" ], "fields": [ "CPmin", "CPmax" ], "rows": 42, "table": true, "tojson": true }, { "name": "days0", "title": "A template for search schedule data", "object": "days0", "class": [ "numeric" ], "fields": [], "table": false, "tojson": true }, { "name": "pkdata0", "title": "A template for summarized searcher efficiency data with the number of carcasses available and the number discovered for N = 12 search occasions", "object": "pkdata0", "class": [ "list" ], "fields": [], "table": true, "tojson": true } ], "_help": [ { "page": "cpdata0", "title": "A template for carcass persistence data with interval-censored carcass persistence times", "topics": [ "cpdata0" ] }, { "page": "days0", "title": "A template for search schedule data", "topics": [ "days0" ] }, { "page": "eoa3", "title": "Evidence of Absence", "topics": [ "eoa3" ] }, { "page": "est_cp0", "title": "Fit cp carcass persistence models", "topics": [ "est_cp0" ] }, { "page": "est_g0", "title": "estimate g from fitted pk and cp models and search schedule", "topics": [ "est_g0" ] }, { "page": "est_pk0", "title": "Fit pk searcher efficiency models", "topics": [ "est_pk0" ] }, { "page": "fmmax", "title": "Find suitable mmax for clipping improper priors for M", "topics": [ "fmmax", "fmmax.ab" ] }, { "page": "getab", "title": "retrieve EoA parameterization from 'survival' parameterization of a fitted cp model (or 'survreg' object with exponential, weibull, lognormal, or loglogistic distribution)", "topics": [ "getab" ] }, { "page": "MpriorOK", "title": "Check validity of format of custom prior for M", "topics": [ "MpriorOK" ] }, { "page": "pkdata0", "title": "A template for summarized searcher efficiency data with the number of carcasses available and the number discovered for N = 12 search occasions", "topics": [ "pkdata0" ] }, { "page": "postM", "title": "Calculate posterior distribution of M and extract statistics (M* and CI)", "topics": [ "calcMstar", "MCI", "postM", "postM.ab" ] }, { "page": "sim_cp0", "title": "generate random cp parameters or persistence times", "topics": [ "sim_cp0" ] }, { "page": "sim_pk0", "title": "Simulate pk parameters from model", "topics": [ "sim_pk0" ] }, { "page": "summary.estg", "title": "Summary statistics for estimated g", "topics": [ "summary.estg" ] }, { "page": "summary.estpk", "title": "Summary statistics for estimated p and p parameters", "topics": [ "summary.estpk" ] } ], "_rundeps": [ "actuar", "base64enc", "bslib", "cachem", "cli", "coda", "commonmark", "cpp11", "crosstalk", "digest", "DT", "evaluate", "expint", "fastmap", "fontawesome", "fs", "generics", "GenEst", "glue", "gsl", "gtools", "hellno", "highr", "htmltools", "htmlwidgets", "httpuv", "jquerylib", "jsonlite", "knitr", "later", "lattice", "lazyeval", "lifecycle", "lubridate", "magrittr", "MASS", "Matrix", "matrixStats", "memoise", "mime", "mvtnorm", "otel", "promises", "R6", "rappdirs", "Rcpp", "rjags", 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